# Database feature summary for Drosophila melanogaster from FlyBase Chado DB r4.1.1 [20050421] # ALL chromosomes CDS 72546 DNA_motif 5 RNA_motif 1 aberration_junction 86 chromosome_arm 7 enhancer 27 exon 63053 five_prime_untranslated_region 19820 gene 14066 golden_path_region 437 insertion_site 458 intron 49927 mRNA 18941 match:assembly:path 434 match:aubrey_cytolocator:cytology 5770 match:bdgp_unknown_clonelocator:scaffoldBACs 706 match:blastx_masked:aa_SPTR.dmel 207911 match:blastx_masked:aa_SPTR.insect 16610 match:blastx_masked:aa_SPTR.othinv 21451 match:blastx_masked:aa_SPTR.othvert 18036 match:blastx_masked:aa_SPTR.plant 11997 match:blastx_masked:aa_SPTR.primate 20850 match:blastx_masked:aa_SPTR.rodent 21644 match:blastx_masked:aa_SPTR.worm 13765 match:blastx_masked:aa_SPTR.yeast 5593 match:dmel_r3_to_dmel_r4_migration:dmel_r3_affy_oligos 197525 match:genie_masked 11063 match:genscan_masked 17811 match:promoter 36921 match:repeat_runner_seg 9198 match:repeatmasker 11758 match:sim4:na_ARGs.dros 1062 match:sim4:na_ARGsCDS.dros 984 match:sim4:na_DGC.in_process.dros 6458 match:sim4:na_HDP_RNAi.dmel 110 match:sim4:na_HDP_mRNA.dmel 139 match:sim4:na_dbEST.diff.dmel 85910 match:sim4:na_dbEST.same.dmel 169078 match:sim4:na_gadfly.dros.RELEASE2 14249 match:sim4:na_gb.dmel 26531 match:sim4:na_gb.tpa.dmel 2214 match:sim4:na_smallRNA.dros 98 match:sim4:na_transcript.dmel.RELEASE31 19001 match:sim4:na_transcript.dmel.RELEASE32 18799 match:sim4tandem:na_gb.dmel 28787 match:tRNAscan-SE 295 match:tblastx_masked:na_dbEST.insect 34107 match:tblastxwrap_masked:na_baylorf1_scfchunk.dpse 263465 match:tblastxwrap_masked:na_scf_chunk_agambiae.fa 101190 match_part:assembly:path 434 match_part:blastx_masked:aa_SPTR.dmel 364011 match_part:blastx_masked:aa_SPTR.insect 37019 match_part:blastx_masked:aa_SPTR.othinv 52267 match_part:blastx_masked:aa_SPTR.othvert 40052 match_part:blastx_masked:aa_SPTR.plant 24905 match_part:blastx_masked:aa_SPTR.primate 52033 match_part:blastx_masked:aa_SPTR.rodent 53215 match_part:blastx_masked:aa_SPTR.worm 32321 match_part:blastx_masked:aa_SPTR.yeast 11381 match_part:genie_masked 41282 match_part:genscan_masked 72887 match_part:promoter 36921 match_part:repeat_runner_seg 9198 match_part:repeatmasker 11758 match_part:sim4:na_ARGs.dros 5621 match_part:sim4:na_ARGsCDS.dros 4720 match_part:sim4:na_DGC.in_process.dros 10821 match_part:sim4:na_HDP_RNAi.dmel 294 match_part:sim4:na_HDP_mRNA.dmel 164 match_part:sim4:na_dbEST.diff.dmel 158509 match_part:sim4:na_dbEST.same.dmel 347084 match_part:sim4:na_gadfly.dros.RELEASE2 57603 match_part:sim4:na_gb.dmel 78406 match_part:sim4:na_gb.tpa.dmel 2260 match_part:sim4:na_smallRNA.dros 124 match_part:sim4:na_transcript.dmel.RELEASE31 86217 match_part:sim4:na_transcript.dmel.RELEASE32 89670 match_part:sim4tandem:na_gb.dmel 83523 match_part:tRNAscan-SE 295 match_part:tblastx_masked:na_dbEST.insect 51275 match_part:tblastxwrap_masked:na_baylorf1_scfchunk.dpse 263465 match_part:tblastxwrap_masked:na_scf_chunk_agambiae.fa 101190 mature_peptide 8 ncRNA 144 point_mutation 485 polyA_site 107 protein 18941 protein_binding_site 92 pseudogene 39 rRNA 96 region 30 regulatory_region 137 remark 52 repeat_region 1 rescue_fragment 136 sequence_variant 232 signal_peptide 1 snRNA 29 snoRNA 28 tRNA 295 three_prime_untranslated_region 14372 transposable_element 1571 transposable_element_insertion_site 16404 #================================================== # Chromosome dmel2L CDS 12818 aberration_junction 22 chromosome_arm 1 enhancer 5 exon 11201 five_prime_untranslated_region 3489 gene 2537 golden_path_region 83 insertion_site 217 intron 8848 mRNA 3353 match:assembly:path 83 match:aubrey_cytolocator:cytology 946 match:bdgp_unknown_clonelocator:scaffoldBACs 180 match:blastx_masked:aa_SPTR.dmel 40528 match:blastx_masked:aa_SPTR.insect 3440 match:blastx_masked:aa_SPTR.othinv 4233 match:blastx_masked:aa_SPTR.othvert 3631 match:blastx_masked:aa_SPTR.plant 2524 match:blastx_masked:aa_SPTR.primate 4095 match:blastx_masked:aa_SPTR.rodent 4251 match:blastx_masked:aa_SPTR.worm 2825 match:blastx_masked:aa_SPTR.yeast 1237 match:dmel_r3_to_dmel_r4_migration:dmel_r3_affy_oligos 35420 match:genscan_masked 3534 match:promoter 6850 match:repeatmasker 1726 match:sim4:na_ARGs.dros 368 match:sim4:na_ARGsCDS.dros 335 match:sim4:na_DGC.in_process.dros 1151 match:sim4:na_HDP_RNAi.dmel 13 match:sim4:na_dbEST.diff.dmel 14735 match:sim4:na_dbEST.same.dmel 29988 match:sim4:na_gadfly.dros.RELEASE2 2507 match:sim4:na_gb.dmel 4317 match:sim4:na_gb.tpa.dmel 357 match:sim4:na_smallRNA.dros 43 match:sim4:na_transcript.dmel.RELEASE31 3387 match:sim4:na_transcript.dmel.RELEASE32 3400 match:sim4tandem:na_gb.dmel 4531 match:tRNAscan-SE 40 match:tblastx_masked:na_dbEST.insect 7223 match:tblastxwrap_masked:na_baylorf1_scfchunk.dpse 49872 match:tblastxwrap_masked:na_scf_chunk_agambiae.fa 21593 match_part:assembly:path 83 match_part:blastx_masked:aa_SPTR.dmel 70383 match_part:blastx_masked:aa_SPTR.insect 7452 match_part:blastx_masked:aa_SPTR.othinv 9737 match_part:blastx_masked:aa_SPTR.othvert 7693 match_part:blastx_masked:aa_SPTR.plant 5004 match_part:blastx_masked:aa_SPTR.primate 9588 match_part:blastx_masked:aa_SPTR.rodent 9941 match_part:blastx_masked:aa_SPTR.worm 6174 match_part:blastx_masked:aa_SPTR.yeast 2384 match_part:genscan_masked 13635 match_part:promoter 6850 match_part:repeatmasker 1726 match_part:sim4:na_ARGs.dros 1851 match_part:sim4:na_ARGsCDS.dros 1472 match_part:sim4:na_DGC.in_process.dros 1878 match_part:sim4:na_HDP_RNAi.dmel 38 match_part:sim4:na_dbEST.diff.dmel 26990 match_part:sim4:na_dbEST.same.dmel 60103 match_part:sim4:na_gadfly.dros.RELEASE2 10016 match_part:sim4:na_gb.dmel 12963 match_part:sim4:na_gb.tpa.dmel 363 match_part:sim4:na_smallRNA.dros 48 match_part:sim4:na_transcript.dmel.RELEASE31 15221 match_part:sim4:na_transcript.dmel.RELEASE32 16054 match_part:sim4tandem:na_gb.dmel 13479 match_part:tRNAscan-SE 40 match_part:tblastx_masked:na_dbEST.insect 10263 match_part:tblastxwrap_masked:na_baylorf1_scfchunk.dpse 49872 match_part:tblastxwrap_masked:na_scf_chunk_agambiae.fa 21593 mature_peptide 3 ncRNA 30 point_mutation 179 polyA_site 41 protein 3353 protein_binding_site 17 pseudogene 11 region 11 regulatory_region 18 remark 4 rescue_fragment 41 sequence_variant 84 snRNA 15 snoRNA 4 tRNA 41 three_prime_untranslated_region 2529 transposable_element 305 transposable_element_insertion_site 3116 #================================================== # Chromosome dmel2L_r3 RNA_motif 1 #================================================== # Chromosome dmel2R CDS 15204 DNA_motif 1 aberration_junction 7 chromosome_arm 1 enhancer 14 exon 13230 five_prime_untranslated_region 4026 gene 2947 golden_path_region 74 insertion_site 128 intron 10461 mRNA 3854 match:assembly:path 75 match:aubrey_cytolocator:cytology 1278 match:bdgp_unknown_clonelocator:scaffoldBACs 166 match:blastx_masked:aa_SPTR.dmel 40382 match:blastx_masked:aa_SPTR.insect 3364 match:blastx_masked:aa_SPTR.othinv 4081 match:blastx_masked:aa_SPTR.othvert 3457 match:blastx_masked:aa_SPTR.plant 2365 match:blastx_masked:aa_SPTR.primate 4131 match:blastx_masked:aa_SPTR.rodent 4326 match:blastx_masked:aa_SPTR.worm 2681 match:blastx_masked:aa_SPTR.yeast 1008 match:dmel_r3_to_dmel_r4_migration:dmel_r3_affy_oligos 38879 match:genie_masked 2639 match:genscan_masked 3169 match:promoter 5700 match:repeat_runner_seg 2463 match:repeatmasker 2652 match:sim4:na_ARGs.dros 286 match:sim4:na_ARGsCDS.dros 270 match:sim4:na_DGC.in_process.dros 1241 match:sim4:na_HDP_RNAi.dmel 19 match:sim4:na_dbEST.diff.dmel 18055 match:sim4:na_dbEST.same.dmel 34275 match:sim4:na_gadfly.dros.RELEASE2 2834 match:sim4:na_gb.dmel 4653 match:sim4:na_gb.tpa.dmel 403 match:sim4:na_smallRNA.dros 6 match:sim4:na_transcript.dmel.RELEASE31 3875 match:sim4:na_transcript.dmel.RELEASE32 3849 match:sim4tandem:na_gb.dmel 5073 match:tRNAscan-SE 100 match:tblastx_masked:na_dbEST.insect 6350 match:tblastxwrap_masked:na_baylorf1_scfchunk.dpse 52828 match:tblastxwrap_masked:na_scf_chunk_agambiae.fa 20514 match_part:assembly:path 75 match_part:blastx_masked:aa_SPTR.dmel 74608 match_part:blastx_masked:aa_SPTR.insect 7749 match_part:blastx_masked:aa_SPTR.othinv 10504 match_part:blastx_masked:aa_SPTR.othvert 8003 match_part:blastx_masked:aa_SPTR.plant 5148 match_part:blastx_masked:aa_SPTR.primate 10657 match_part:blastx_masked:aa_SPTR.rodent 10917 match_part:blastx_masked:aa_SPTR.worm 6681 match_part:blastx_masked:aa_SPTR.yeast 2164 match_part:genie_masked 10660 match_part:genscan_masked 13865 match_part:promoter 5700 match_part:repeat_runner_seg 2463 match_part:repeatmasker 2652 match_part:sim4:na_ARGs.dros 1700 match_part:sim4:na_ARGsCDS.dros 1483 match_part:sim4:na_DGC.in_process.dros 2118 match_part:sim4:na_HDP_RNAi.dmel 38 match_part:sim4:na_dbEST.diff.dmel 34369 match_part:sim4:na_dbEST.same.dmel 72942 match_part:sim4:na_gadfly.dros.RELEASE2 12210 match_part:sim4:na_gb.dmel 16180 match_part:sim4:na_gb.tpa.dmel 409 match_part:sim4:na_smallRNA.dros 23 match_part:sim4:na_transcript.dmel.RELEASE31 18650 match_part:sim4:na_transcript.dmel.RELEASE32 19122 match_part:sim4tandem:na_gb.dmel 17290 match_part:tRNAscan-SE 100 match_part:tblastx_masked:na_dbEST.insect 9912 match_part:tblastxwrap_masked:na_baylorf1_scfchunk.dpse 52828 match_part:tblastxwrap_masked:na_scf_chunk_agambiae.fa 20514 mature_peptide 4 ncRNA 39 point_mutation 143 polyA_site 31 protein 3854 protein_binding_site 9 pseudogene 12 rRNA 96 region 5 regulatory_region 13 remark 33 rescue_fragment 30 sequence_variant 40 signal_peptide 1 snoRNA 18 tRNA 98 three_prime_untranslated_region 2987 transposable_element 312 transposable_element_insertion_site 3913 #================================================== # Chromosome dmel2R_r3 remark 2 #================================================== # Chromosome dmel3L CDS 13563 DNA_motif 4 aberration_junction 1 chromosome_arm 1 enhancer 1 exon 11978 five_prime_untranslated_region 3833 gene 2718 golden_path_region 83 insertion_site 17 intron 9445 mRNA 3681 match:assembly:path 84 match:aubrey_cytolocator:cytology 1025 match:bdgp_unknown_clonelocator:scaffoldBACs 32 match:blastx_masked:aa_SPTR.dmel 36506 match:blastx_masked:aa_SPTR.insect 2984 match:blastx_masked:aa_SPTR.othinv 4046 match:blastx_masked:aa_SPTR.othvert 3181 match:blastx_masked:aa_SPTR.plant 2133 match:blastx_masked:aa_SPTR.primate 3836 match:blastx_masked:aa_SPTR.rodent 3968 match:blastx_masked:aa_SPTR.worm 2427 match:blastx_masked:aa_SPTR.yeast 998 match:dmel_r3_to_dmel_r4_migration:dmel_r3_affy_oligos 38372 match:genie_masked 2662 match:genscan_masked 3606 match:promoter 7829 match:repeat_runner_seg 2297 match:repeatmasker 2353 match:sim4:na_ARGs.dros 65 match:sim4:na_ARGsCDS.dros 62 match:sim4:na_DGC.in_process.dros 1355 match:sim4:na_HDP_RNAi.dmel 32 match:sim4:na_dbEST.diff.dmel 17888 match:sim4:na_dbEST.same.dmel 33322 match:sim4:na_gadfly.dros.RELEASE2 2797 match:sim4:na_gb.dmel 4405 match:sim4:na_gb.tpa.dmel 476 match:sim4:na_smallRNA.dros 4 match:sim4:na_transcript.dmel.RELEASE31 3650 match:sim4:na_transcript.dmel.RELEASE32 3522 match:sim4tandem:na_gb.dmel 4539 match:tRNAscan-SE 49 match:tblastx_masked:na_dbEST.insect 6442 match:tblastxwrap_masked:na_baylorf1_scfchunk.dpse 49825 match:tblastxwrap_masked:na_scf_chunk_agambiae.fa 17793 match_part:assembly:path 84 match_part:blastx_masked:aa_SPTR.dmel 61811 match_part:blastx_masked:aa_SPTR.insect 6294 match_part:blastx_masked:aa_SPTR.othinv 9463 match_part:blastx_masked:aa_SPTR.othvert 6914 match_part:blastx_masked:aa_SPTR.plant 4382 match_part:blastx_masked:aa_SPTR.primate 9380 match_part:blastx_masked:aa_SPTR.rodent 9639 match_part:blastx_masked:aa_SPTR.worm 5393 match_part:blastx_masked:aa_SPTR.yeast 2024 match_part:genie_masked 9478 match_part:genscan_masked 14226 match_part:promoter 7829 match_part:repeat_runner_seg 2297 match_part:repeatmasker 2353 match_part:sim4:na_ARGs.dros 245 match_part:sim4:na_ARGsCDS.dros 207 match_part:sim4:na_DGC.in_process.dros 2240 match_part:sim4:na_HDP_RNAi.dmel 100 match_part:sim4:na_dbEST.diff.dmel 32412 match_part:sim4:na_dbEST.same.dmel 67635 match_part:sim4:na_gadfly.dros.RELEASE2 10967 match_part:sim4:na_gb.dmel 14253 match_part:sim4:na_gb.tpa.dmel 510 match_part:sim4:na_smallRNA.dros 4 match_part:sim4:na_transcript.dmel.RELEASE31 15875 match_part:sim4:na_transcript.dmel.RELEASE32 16126 match_part:sim4tandem:na_gb.dmel 14536 match_part:tRNAscan-SE 49 match_part:tblastx_masked:na_dbEST.insect 9631 match_part:tblastxwrap_masked:na_baylorf1_scfchunk.dpse 49825 match_part:tblastxwrap_masked:na_scf_chunk_agambiae.fa 17793 mature_peptide 1 ncRNA 23 point_mutation 17 polyA_site 7 protein 3681 protein_binding_site 1 pseudogene 3 region 9 regulatory_region 6 remark 7 repeat_region 1 rescue_fragment 5 sequence_variant 11 snRNA 3 snoRNA 3 tRNA 50 three_prime_untranslated_region 2786 transposable_element 288 transposable_element_insertion_site 2790 #================================================== # Chromosome dmel3R CDS 18385 aberration_junction 39 chromosome_arm 1 enhancer 4 exon 15870 five_prime_untranslated_region 4920 gene 3502 golden_path_region 118 insertion_site 62 intron 12611 mRNA 4722 match:assembly:path 118 match:aubrey_cytolocator:cytology 1313 match:bdgp_unknown_clonelocator:scaffoldBACs 234 match:blastx_masked:aa_SPTR.dmel 55768 match:blastx_masked:aa_SPTR.insect 4160 match:blastx_masked:aa_SPTR.othinv 5509 match:blastx_masked:aa_SPTR.othvert 4707 match:blastx_masked:aa_SPTR.plant 2993 match:blastx_masked:aa_SPTR.primate 5265 match:blastx_masked:aa_SPTR.rodent 5482 match:blastx_masked:aa_SPTR.worm 3545 match:blastx_masked:aa_SPTR.yeast 1378 match:dmel_r3_to_dmel_r4_migration:dmel_r3_affy_oligos 49768 match:genie_masked 3338 match:genscan_masked 4289 match:promoter 8122 match:repeat_runner_seg 1942 match:repeatmasker 1730 match:sim4:na_ARGs.dros 219 match:sim4:na_ARGsCDS.dros 211 match:sim4:na_DGC.in_process.dros 1572 match:sim4:na_HDP_RNAi.dmel 23 match:sim4:na_dbEST.diff.dmel 21492 match:sim4:na_dbEST.same.dmel 40660 match:sim4:na_gadfly.dros.RELEASE2 3547 match:sim4:na_gb.dmel 5439 match:sim4:na_gb.tpa.dmel 652 match:sim4:na_smallRNA.dros 34 match:sim4:na_transcript.dmel.RELEASE31 4697 match:sim4:na_transcript.dmel.RELEASE32 4706 match:sim4tandem:na_gb.dmel 5737 match:tRNAscan-SE 80 match:tblastx_masked:na_dbEST.insect 8045 match:tblastxwrap_masked:na_baylorf1_scfchunk.dpse 71436 match:tblastxwrap_masked:na_scf_chunk_agambiae.fa 25021 match_part:assembly:path 118 match_part:blastx_masked:aa_SPTR.dmel 99032 match_part:blastx_masked:aa_SPTR.insect 9684 match_part:blastx_masked:aa_SPTR.othinv 13802 match_part:blastx_masked:aa_SPTR.othvert 10413 match_part:blastx_masked:aa_SPTR.plant 6338 match_part:blastx_masked:aa_SPTR.primate 13235 match_part:blastx_masked:aa_SPTR.rodent 13557 match_part:blastx_masked:aa_SPTR.worm 8246 match_part:blastx_masked:aa_SPTR.yeast 2827 match_part:genie_masked 12883 match_part:genscan_masked 18163 match_part:promoter 8122 match_part:repeat_runner_seg 1942 match_part:repeatmasker 1730 match_part:sim4:na_ARGs.dros 1200 match_part:sim4:na_ARGsCDS.dros 1061 match_part:sim4:na_DGC.in_process.dros 2689 match_part:sim4:na_HDP_RNAi.dmel 60 match_part:sim4:na_dbEST.diff.dmel 40756 match_part:sim4:na_dbEST.same.dmel 85677 match_part:sim4:na_gadfly.dros.RELEASE2 14431 match_part:sim4:na_gb.dmel 18325 match_part:sim4:na_gb.tpa.dmel 652 match_part:sim4:na_smallRNA.dros 38 match_part:sim4:na_transcript.dmel.RELEASE31 21421 match_part:sim4:na_transcript.dmel.RELEASE32 22274 match_part:sim4tandem:na_gb.dmel 19251 match_part:tRNAscan-SE 80 match_part:tblastx_masked:na_dbEST.insect 12382 match_part:tblastxwrap_masked:na_baylorf1_scfchunk.dpse 71436 match_part:tblastxwrap_masked:na_scf_chunk_agambiae.fa 25021 ncRNA 32 point_mutation 102 polyA_site 21 protein 4722 protein_binding_site 45 pseudogene 9 region 1 regulatory_region 90 remark 2 rescue_fragment 28 sequence_variant 66 snRNA 9 snoRNA 1 tRNA 80 three_prime_untranslated_region 3611 transposable_element 288 transposable_element_insertion_site 3513 #================================================== # Chromosome dmel4 CDS 952 chromosome_arm 1 exon 807 five_prime_untranslated_region 298 gene 83 golden_path_region 5 intron 754 mRNA 204 match:aubrey_cytolocator:cytology 53 match:bdgp_unknown_clonelocator:scaffoldBACs 16 match:blastx_masked:aa_SPTR.dmel 2367 match:blastx_masked:aa_SPTR.insect 186 match:blastx_masked:aa_SPTR.othinv 204 match:blastx_masked:aa_SPTR.othvert 207 match:blastx_masked:aa_SPTR.plant 71 match:blastx_masked:aa_SPTR.primate 227 match:blastx_masked:aa_SPTR.rodent 158 match:blastx_masked:aa_SPTR.worm 153 match:blastx_masked:aa_SPTR.yeast 48 match:dmel_r3_to_dmel_r4_migration:dmel_r3_affy_oligos 1249 match:genie_masked 25 match:genscan_masked 82 match:promoter 690 match:repeatmasker 882 match:sim4:na_DGC.in_process.dros 85 match:sim4:na_HDP_mRNA.dmel 139 match:sim4:na_dbEST.diff.dmel 429 match:sim4:na_dbEST.same.dmel 1524 match:sim4:na_gadfly.dros.RELEASE2 100 match:sim4:na_gb.dmel 504 match:sim4:na_gb.tpa.dmel 7 match:sim4:na_transcript.dmel.RELEASE31 324 match:sim4:na_transcript.dmel.RELEASE32 190 match:sim4tandem:na_gb.dmel 508 match:tblastx_masked:na_dbEST.insect 390 match:tblastxwrap_masked:na_baylorf1_scfchunk.dpse 1796 match:tblastxwrap_masked:na_scf_chunk_agambiae.fa 1139 match_part:blastx_masked:aa_SPTR.dmel 4777 match_part:blastx_masked:aa_SPTR.insect 480 match_part:blastx_masked:aa_SPTR.othinv 611 match_part:blastx_masked:aa_SPTR.othvert 593 match_part:blastx_masked:aa_SPTR.plant 168 match_part:blastx_masked:aa_SPTR.primate 755 match_part:blastx_masked:aa_SPTR.rodent 511 match_part:blastx_masked:aa_SPTR.worm 566 match_part:blastx_masked:aa_SPTR.yeast 127 match_part:genie_masked 72 match_part:genscan_masked 580 match_part:promoter 690 match_part:repeatmasker 882 match_part:sim4:na_DGC.in_process.dros 205 match_part:sim4:na_HDP_mRNA.dmel 164 match_part:sim4:na_dbEST.diff.dmel 940 match_part:sim4:na_dbEST.same.dmel 3733 match_part:sim4:na_gadfly.dros.RELEASE2 686 match_part:sim4:na_gb.dmel 1515 match_part:sim4:na_gb.tpa.dmel 7 match_part:sim4:na_transcript.dmel.RELEASE31 1738 match_part:sim4:na_transcript.dmel.RELEASE32 1723 match_part:sim4tandem:na_gb.dmel 1519 match_part:tblastx_masked:na_dbEST.insect 630 match_part:tblastxwrap_masked:na_baylorf1_scfchunk.dpse 1796 match_part:tblastxwrap_masked:na_scf_chunk_agambiae.fa 1139 protein 204 pseudogene 3 remark 1 three_prime_untranslated_region 146 transposable_element 102 transposable_element_insertion_site 49 #================================================== # Chromosome dmelU chromosome_arm 1 #================================================== # Chromosome dmelX CDS 11624 aberration_junction 17 chromosome_arm 1 enhancer 3 exon 9967 five_prime_untranslated_region 3254 gene 2279 golden_path_region 74 insertion_site 34 intron 7808 mRNA 3127 match:assembly:path 74 match:aubrey_cytolocator:cytology 1155 match:bdgp_unknown_clonelocator:scaffoldBACs 78 match:blastx_masked:aa_SPTR.dmel 32360 match:blastx_masked:aa_SPTR.insect 2476 match:blastx_masked:aa_SPTR.othinv 3378 match:blastx_masked:aa_SPTR.othvert 2853 match:blastx_masked:aa_SPTR.plant 1911 match:blastx_masked:aa_SPTR.primate 3296 match:blastx_masked:aa_SPTR.rodent 3459 match:blastx_masked:aa_SPTR.worm 2134 match:blastx_masked:aa_SPTR.yeast 924 match:dmel_r3_to_dmel_r4_migration:dmel_r3_affy_oligos 33837 match:genie_masked 2399 match:genscan_masked 3131 match:promoter 7730 match:repeat_runner_seg 2496 match:repeatmasker 2415 match:sim4:na_ARGs.dros 124 match:sim4:na_ARGsCDS.dros 106 match:sim4:na_DGC.in_process.dros 1054 match:sim4:na_HDP_RNAi.dmel 23 match:sim4:na_dbEST.diff.dmel 13311 match:sim4:na_dbEST.same.dmel 29309 match:sim4:na_gadfly.dros.RELEASE2 2464 match:sim4:na_gb.dmel 7213 match:sim4:na_gb.tpa.dmel 319 match:sim4:na_smallRNA.dros 11 match:sim4:na_transcript.dmel.RELEASE31 3068 match:sim4:na_transcript.dmel.RELEASE32 3132 match:sim4tandem:na_gb.dmel 8399 match:tRNAscan-SE 26 match:tblastx_masked:na_dbEST.insect 5657 match:tblastxwrap_masked:na_baylorf1_scfchunk.dpse 37708 match:tblastxwrap_masked:na_scf_chunk_agambiae.fa 15130 match_part:assembly:path 74 match_part:blastx_masked:aa_SPTR.dmel 53400 match_part:blastx_masked:aa_SPTR.insect 5360 match_part:blastx_masked:aa_SPTR.othinv 8150 match_part:blastx_masked:aa_SPTR.othvert 6436 match_part:blastx_masked:aa_SPTR.plant 3865 match_part:blastx_masked:aa_SPTR.primate 8418 match_part:blastx_masked:aa_SPTR.rodent 8650 match_part:blastx_masked:aa_SPTR.worm 5261 match_part:blastx_masked:aa_SPTR.yeast 1855 match_part:genie_masked 8189 match_part:genscan_masked 12418 match_part:promoter 7730 match_part:repeat_runner_seg 2496 match_part:repeatmasker 2415 match_part:sim4:na_ARGs.dros 625 match_part:sim4:na_ARGsCDS.dros 497 match_part:sim4:na_DGC.in_process.dros 1691 match_part:sim4:na_HDP_RNAi.dmel 58 match_part:sim4:na_dbEST.diff.dmel 23042 match_part:sim4:na_dbEST.same.dmel 56994 match_part:sim4:na_gadfly.dros.RELEASE2 9293 match_part:sim4:na_gb.dmel 15170 match_part:sim4:na_gb.tpa.dmel 319 match_part:sim4:na_smallRNA.dros 11 match_part:sim4:na_transcript.dmel.RELEASE31 13312 match_part:sim4:na_transcript.dmel.RELEASE32 14371 match_part:sim4tandem:na_gb.dmel 17448 match_part:tRNAscan-SE 26 match_part:tblastx_masked:na_dbEST.insect 8457 match_part:tblastxwrap_masked:na_baylorf1_scfchunk.dpse 37708 match_part:tblastxwrap_masked:na_scf_chunk_agambiae.fa 15130 ncRNA 20 point_mutation 44 polyA_site 7 protein 3127 protein_binding_site 20 pseudogene 1 region 4 regulatory_region 10 remark 3 rescue_fragment 32 sequence_variant 31 snRNA 2 snoRNA 2 tRNA 26 three_prime_untranslated_region 2313 transposable_element 276 transposable_element_insertion_site 3023 #==================================================