Release 4.3 Summary Changes new: 63 split: 5 r4.2 genes split into 12 new r4.3 genes merged: 42 r4.2 genes merged into 19 new r4.3 genes restored: 3 deleted: 2 new dicistronics: 4 miscellaneous: 5 ------------------------------------------------------------------------ new: 63 *a CG33977 *u New annotation (CG33977) in release 4.3 of the genome annotation. # *a CG33978 *u New annotation (CG33978) in release 4.3 of the genome annotation. # *a CG33982 *u New annotation (CG33982) in release 4.3 of the genome annotation. # *a CG33992 *u New annotation (CG33992) in release 4.3 of the genome annotation. # *a CG33998 *u New annotation (CG33998) in release 4.3 of the genome annotation. # *a CG33999 *u New annotation (CG33999) in release 4.3 of the genome annotation. # *a CG34000 *u New annotation (CG34000) in release 4.3 of the genome annotation. # *a CG34001 *u New annotation (CG34001) in release 4.3 of the genome annotation. # *a CG34002 *u New annotation (CG34002) in release 4.3 of the genome annotation. # *a CG34004 *u New annotation (CG34004) in release 4.3 of the genome annotation. # *a CG34005 *u New annotation (CG34005) in release 4.3 of the genome annotation. # *a CG34006 *u New annotation (CG34006) in release 4.3 of the genome annotation. # *a CG34007 *u New annotation (CG34007) in release 4.3 of the genome annotation. # *a CG34008 *u New annotation (CG34008) in release 4.3 of the genome annotation. # *a CG34009 *u New annotation (CG34009) in release 4.3 of the genome annotation. # *a CG34010 *u New annotation (CG34010) in release 4.3 of the genome annotation. # *a CG34011 *u New annotation (CG34011) in release 4.3 of the genome annotation. # *a CG34012 *u New annotation (CG34012) in release 4.3 of the genome annotation. # *a CG34013 *u New annotation (CG34013) in release 4.3 of the genome annotation. # *a CG34014 *u New annotation (CG34014) in release 4.3 of the genome annotation. # *a CG34015 *u New annotation (CG34015) in release 4.3 of the genome annotation. # *a CG34016 *u New annotation (CG34016) in release 4.3 of the genome annotation. # *a CG34017 *u New annotation (CG34017) in release 4.3 of the genome annotation. # *a CG34018 *u New annotation (CG34018) in release 4.3 of the genome annotation. # *a CG34019 *u New annotation (CG34019) in release 4.3 of the genome annotation. # *a CG34021 *u New annotation (CG34021) in release 4.3 of the genome annotation. # *a CG34022 *u New annotation (CG34022) in release 4.3 of the genome annotation. # *a CG34023 *u New annotation (CG34023) in release 4.3 of the genome annotation. # *a CG34024 *u New annotation (CG34024) in release 4.3 of the genome annotation. # *a CG34025 *u New annotation (CG34025) in release 4.3 of the genome annotation. # *a CG34026 *u New annotation (CG34026) in release 4.3 of the genome annotation. # *a CG34027 *u New annotation (CG34027) in release 4.3 of the genome annotation. # *a CG34028 *u New annotation (CG34028) in release 4.3 of the genome annotation. # *a CG34029 *u New annotation (CG34029) in release 4.3 of the genome annotation. # *a CG34030 *u New annotation (CG34030) in release 4.3 of the genome annotation. # *a CG34031 *u New annotation (CG34031) in release 4.3 of the genome annotation. # *a CG34032 *u New annotation (CG34032) in release 4.3 of the genome annotation. # *a CG34033 *u New annotation (CG34033) in release 4.3 of the genome annotation. # *a CG34034 *u New annotation (CG34034) in release 4.3 of the genome annotation. # *a CG34035 *u New annotation (CG34035) in release 4.3 of the genome annotation. # *a CG34036 *u New annotation (CG34036) in release 4.3 of the genome annotation. # *a CG34037 *u New annotation (CG34037) in release 4.3 of the genome annotation. # *a CG34038 *u New annotation (CG34038) in release 4.3 of the genome annotation. # *a CG34039 *u New annotation (CG34039) in release 4.3 of the genome annotation. # *a CG34040 *u New annotation (CG34040) in release 4.3 of the genome annotation. # *a CG34041 *u New annotation (CG34041) in release 4.3 of the genome annotation. # *a CG34043 *u New annotation (CG34043) in release 4.3 of the genome annotation. # *a CG34044 *u New annotation (CG34044) in release 4.3 of the genome annotation. # *a CG34045 *u New annotation (CG34045) in release 4.3 of the genome annotation. # *a CG34046 *u New annotation (CG34046) in release 4.3 of the genome annotation. # *a CG34047 *u New annotation (CG34047) in release 4.3 of the genome annotation. # *a CG34048 *u New annotation (CG34048) in release 4.3 of the genome annotation. # *a CG34049 *u New annotation (CG34049) in release 4.3 of the genome annotation. # *a CG34050 *u New annotation (CG34050) in release 4.3 of the genome annotation. # *a CG34051 *u New annotation (CG34051) in release 4.3 of the genome annotation. # *a CG34052 *u New annotation (CG34052) in release 4.3 of the genome annotation. # *a CG34053 *u New annotation (CG34053) in release 4.3 of the genome annotation. # *a CG34054 *u New annotation (CG34054) in release 4.3 of the genome annotation. # *a CR33963 *u New annotation (CR33963) in release 4.3 of the genome annotation. # *a IM14 *u New annotation (CG33990) in release 4.3 of the genome annotation. # *a ppk10 *u New annotation (CG34042) in release 4.3 of the genome annotation. # *a tRNA:N5:42Af *u New annotation (CR33973) in release 4.3 of the genome annotation. # *a tRNA:N5:42Ag *u New annotation (CR33972) in release 4.3 of the genome annotation. # ------------------------------------------------------------------------ split: 5 r4.2 genes split into 12 new r4.3 genes *a CG33965 *q Annotation CG1211 split into CG33965 and CG33966 in release 4.3 of *q the genome annotation. # *a CG33966 *q Annotation CG1211 split into CG33965 and CG33966 in release 4.3 of *q the genome annotation. # *a CG33983 *q Release 4.2 annotation CG7973 split into CG33983, CG33984, CG33985 *q and CG33986 in release 4.3 of the genome annotation. # *a CG33984 *q Release 4.2 annotation CG7973 split into CG33983, CG33984, CG33985 *q and CG33986 in release 4.3 of the genome annotation. # *a CG33985 *q Release 4.2 annotation CG7973 split into CG33983, CG33984, CG33985 *q and CG33986 in release 4.3 of the genome annotation. # *a CG33986 *q Release 4.2 annotation CG7973 split into CG33983, CG33984, CG33985 *q and CG33986 in release 4.3 of the genome annotation. # *a CG34056 *q Annotation CG13904 split into CG34056 and CG34057 in release 4.3 of *q the genome annotation. # *a CG34057 *q Annotation CG13904 split into CG34056 and CG34057 in release 4.3 of *q the genome annotation. # *a ppk11 *q Annotation CG4110 split into CG34058 (ppk11) and CG34059 (ppk16) *q in release 4.3 of the genome annotation. # *a ppk16 *q Annotation CG4110 split into CG34058 (ppk11) and CG34059 (ppk16) *q in release 4.3 of the genome annotation. # *a CG17139 *q Annotation CG31722 split into CG17139 and CG17140 in release 4.3 of *q the genome annotation. *q gene_with_dicistronic_processed_transcript (SO:0000722) which encodes *q CG17139 (FBgn0032307), CG17140 (FBgn0032306) *q One or more of the processed transcripts for this gene contain(s) two *q non-overlapping open reading frames (ORFs). The non-overlapping ORFs *q are represented by CG17139 (FBgn0032307), CG17140 (FBgn0032306). # *a CG17140 *q Annotation CG31722 split into CG17139 and CG17140 in release 4.3 of *q the genome annotation. *q gene_with_dicistronic_processed_transcript (SO:0000722) which encodes *q CG17139 (FBgn0032307), CG17140 (FBgn0032306) *q One or more of the processed transcripts for this gene contain(s) two *q non-overlapping open reading frames (ORFs). The non-overlapping ORFs *q are represented by CG17139 (FBgn0032307), CG17140 (FBgn0032306). # ------------------------------------------------------------------------ merged: 42 r4.2 genes merged into 19 new r4.3 genes *a Ance-3 *q Annotations CG17988 and CG31766 merged as CG17988 (which corresponds *q to Ance-3) in release 4.3 of the genome annotation. # *a capt *q Annotations CG5061 and CG5074 merged as CG33979 in release 4.3 of the *q genome annotation. # *a CG9924 *q Annotations CG9924 and CG12537 merged as CG9924 in release 4.3 of the *q genome annotation. # *a CG33958 *q Annotations CG14501 and CG5719 merged as CG33958 in release 4.3 of *q the genome annotation. # *a CG33960 *q Annotations CG30322 and CG4383 merged as CG33960 in release 4.3 of *q the genome annotation. # *a CG33967 *q Annotations CG7552 and CG12600 merged as CG33967 in release 4.3 of *q the genome annotation. # *a CG33968 *q Annotations CG32589 and CG5652 merged as CG33968 in release 4.3 of *q the genome annotation. # *a CG33969 *q Annotations CG5571 and CG32429 merged as CG33969 in release 4.3 of *q the genome annotation. # *a CG33970 *q Annotations CG14559 and CG31085 merged as CG33970 in release 4.3 of *q the genome annotation. # *a CG33975 *q Annotations CG32469 and CG11676 merged as CG33975 in release 4.3 of *q the genome annotation. # *a CG33980 *q Annotations CG15781, CG15782 and CG15783 merged as CG33980 in release *q 4.3 of the genome annotation. # *a CG33988 *q Annotations CG13595, CG13596 and CG18510 merged as CG33988 in release *q 4.3 of the genome annotation. # *a CG33993 *q Annotations CG13289 and CG13290 merged as CG33993 in release 4.3 of *q the genome annotation. # *a Cp7Fa *q Annotations CG15348 and CG15349 merged as CG33962 (which corresponds *q to Cp7Fa) in release 4.3 of the genome annotation. # *a dpr13 *q Annotations CG12557 and CG14493 merged as CG33996 (which corresponds *q to dpr13) in release 4.3 of the genome annotation. # *a fog *q Annotations CG9559, CR41108, CR41109 and CR41110 merged as CG9559 (which *q corresponds to fog) in release 4.3 of the genome annotation. # *a nuf *q Annotations CG7867 and CG32140 merged as CG33991 (which corresponds *q to nuf) in release 4.3 of the genome annotation. # *a Oct&bgr;2R *q Annotations CG6989 and CG18553 merged as CG33976 (which corresponds *q to Oct&bgr;2R) in release 4.3 of the genome annotation. # *a pHCl *q Annotations CG13444 and CG6112 merged as CG33989 (which corresponds *q to pHCl) in release 4.3 of the genome annotation. # ------------------------------------------------------------------------ restored: 3 *a CG13516 *u Annotation CG13516 restored in release 4.3 of the genome annotation. # *a CG13885 *u Annotation CG13885 restored in release 4.3 of the genome annotation. # *a CG17471 *u Annotation CG17471 restored in release 4.3 of the genome annotation. # ------------------------------------------------------------------------ deleted: 2 *a CG31083 *u Annotation CG31083 eliminated in release 4.3 of the genome annotation. # *a CG31316 *u Annotation CG31316 eliminated in release 4.3 of the genome annotation. # ------------------------------------------------------------------------ new dicistronics: 4 *a CG31919 *q gene_with_dicistronic_processed_transcript (SO:0000722) which encodes *q CG33995 (FBgn0053995), CG31919 (FBgn0031674) *q One or more of the processed transcripts for this gene contain(s) two *q non-overlapping open reading frames (ORFs). The non-overlapping ORFs *q are represented by CG33995 (FBgn0053995), CG31919 (FBgn0031674). # *a CG33995 *q gene_with_dicistronic_processed_transcript (SO:0000722) which encodes *q CG33995 (FBgn0053995), CG31919 (FBgn0031674) *q One or more of the processed transcripts for this gene contain(s) two *q non-overlapping open reading frames (ORFs). The non-overlapping ORFs *q are represented by CG33995 (FBgn0053995), CG31919 (FBgn0031674). *u New annotation (CG33995) in release 4.3 of the genome annotation. # *a CG6355 *q gene_with_dicistronic_processed_transcript (SO:0000722) which encodes *q CG33981 (FBgn0053981), CG6355 (FBgn0028741) *q One or more of the processed transcripts for this gene contain(s) two *q non-overlapping open reading frames (ORFs). The non-overlapping ORFs *q are represented by CG33981 (FBgn0053981), CG6355 (FBgn0028741). # *a CG33981 *q gene_with_dicistronic_processed_transcript (SO:0000722) which encodes *q CG33981 (FBgn0053981), CG6355 (FBgn0028741) *q One or more of the processed transcripts for this gene contain(s) two *q non-overlapping open reading frames (ORFs). The non-overlapping ORFs *q are represented by CG33981 (FBgn0053981), CG6355 (FBgn0028741). *u New annotation (CG33981) in release 4.3 of the genome annotation. # *a CG4174 *q gene_with_dicistronic_processed_transcript (SO:0000722) which encodes *q CG4174 (FBgn0036793), CG13380 (FBgn0036799) *q One or more of the processed transcripts for this gene contain(s) two *q non-overlapping open reading frames (ORFs). The non-overlapping ORFs *q are represented by CG4174 (FBgn0036793), CG13380 (FBgn0036799). # *a CG13380 *q gene_with_dicistronic_processed_transcript (SO:0000722) which encodes *q CG4174 (FBgn0036793), CG13380 (FBgn0036799) *q One or more of the processed transcripts for this gene contain(s) two *q non-overlapping open reading frames (ORFs). The non-overlapping ORFs *q are represented by CG4174 (FBgn0036793), CG13380 (FBgn0036799). # *a CG13175 *q gene_with_dicistronic_processed_transcript (SO:0000722) which encodes *q CG13175 (FBgn0033693), CG33964 (FBgn0053964) *q One or more of the processed transcripts for this gene contain(s) two *q non-overlapping open reading frames (ORFs). The non-overlapping ORFs *q are represented by CG13175 (FBgn0033693), CG33964 (FBgn0053964) # *a CG33964 *q Release 4.3 annotation CG33964 contains sequences corresponding to *q a merge of release 2 annotations CG8447 and CG13174. *q gene_with_dicistronic_processed_transcript (SO:0000722) which encodes *q CG13175 (FBgn0033693), CG33964 (FBgn0053964) *q One or more of the processed transcripts for this gene contain(s) two *q non-overlapping open reading frames (ORFs). The non-overlapping ORFs *q are represented by CG13175 (FBgn0033693), CG33964 (FBgn0053964) # ------------------------------------------------------------------------ miscellaneous: 5 *a CG33971 *q Release 4.3 annotation CG33971 corresponds to a part of release 2 annotation *q CG12090 which was removed from the release 3.1 version of CG12090. # *a CG34020 *q The 3' part of release 2 annotation CG15092 (which was deleted in the *q release 3 version of CG15092) has been restored as a distinct annotation, *q CG34020, in release 4.3 of the genome annotation. # *a CG34003 *q Release 4.3 annotation CG34003 corresponds to a part of the release *q 2 annotation CG16882 which was not annotated on the genome in release *q 3 (CG16882 was split into CG33115 and CG31839 in release 3 of the genome *q annotation). CG34003 thus represents the 3rd split product from release *q 2 annotation CG16882. # *a CG34055 *q Annotation CG31350 split into CG33959 and CG34055 in release 4.3 of *q the genome annotation. In addition, release 4.3 annotation CG33959 *q contains sequences corresponding to release 4.2 annotations CG31348 *q and CG31351. # *a Oct&bgr;3R *q Annotation CG31350 split into CG33959 and CG34055 in release 4.3 of *q the genome annotation. In addition, release 4.3 annotation CG33959 *q (which corresponds to Oct&bgr;3R) contains sequences corresponding *q to release 4.2 annotations CG31348 and CG31351. # *a CR33987 *q Release 4.3 annotation CR33987 contains sequences corresponding to *q the 5' exon of release 4.2 annotation CG12630 (this 5' exon is no longer *q present in the release 4.3 CG12630 annotation). *u New annotation (CR33987) in release 4.3 of the genome annotation. # ------------------------------------------------------------------------